FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009270

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009270
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences564253
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCAACAT4250.00452452311.4767631
AATCCAA6150.00680702239.0359935
TCTTGTA6200.0072641928.964714
GTCAAAG6300.0080858768.8482971
CCCGGCA8600.0013414158.10236551
CTTTGAT7850.0053467567.9888291
CAGGAAA12500.00728588746.13187071
GGCAAAG12800.00931171055.9881541
Produced by FastQC (version 0.11.5)