FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009273

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009273
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2035149
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGGGTGG9250.00159161789.13543145
CCCCCAT10458.223886E-69.0169091
CGAACAT12901.14745635E-47.30439471
CTCACTT9950.00382274467.28463031
GTCACCA12800.00649526066.20199358
CCCAGAT15750.0085080385.52244331
TCGATAT22004.4386188E-45.24875833
GTTATGA20950.00123847265.1896471
CGTTGAT19800.00344820795.1249951
TTACGGA22907.650249E-45.04991962
CCTTTAT33052.1914439E-65.04413841
Produced by FastQC (version 0.11.5)