FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009285

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009285
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences440034
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AATCTAC2701.2226566E-418.4888695
CCCGCCT2850.00362632415.0751891
AAATAGC4450.005360071511.2179666
TCTACAG2600.0085102218.2285617
ATAAGAG3350.0086482815.5142493135-139
Produced by FastQC (version 0.11.5)