FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009286

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009286
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1116168
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTAGAG3000.004738562314.4833161
CCTAAAG5350.001523864710.8286481
GTCCAAA5750.002775551510.0753521
CTCAAAT8050.00474894058.0962651
CCCTTAT9650.00285699877.5043091
CTTCGAT12657.3612697E-46.86955741
CCAAAAA15208.5903925E-46.19352341
GATTTAT15650.00126790935.99630075
CAAAAAT26153.0998675E-55.2616261
CAAAGGA18250.00753547345.15844151
Produced by FastQC (version 0.11.5)