FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009287

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009287
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences801565
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTAATT5550.002141822810.3942121
CTTCAAT12801.1078121E-47.3236561
ACAATTT10450.00657286736.8884093
CTTTGAT12000.00333518586.61006931
TTGATAT17306.827336E-45.8252843
CTTTTAT17500.00483778965.3567311
Produced by FastQC (version 0.11.5)