FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009294

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009294
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences533197
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGATCC3000.006133686313.9287333
CCCTCGG3900.002304371712.5590681
CTTCGGA5702.7670726E-411.04820251
CAAAGGA8309.053702E-48.4303551
AAAGAAT12800.00130721956.52909332
Produced by FastQC (version 0.11.5)