FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009295

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009295
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences957791
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACGTCT3353.179068E-517.1000259
CACACGT3254.890732E-415.4212977
ACACGTC4150.003091256112.0781798
AGCACAC4958.747906E-411.5715355
GCACACG5600.002448670810.2284116
AGAGCAC5700.002835936110.0489653
GTTCAAT9302.2222066E-59.2860751
CCCGCAT10200.00521100177.0555951
CCGCATC17950.0070391265.18841362
Produced by FastQC (version 0.11.5)