FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009298

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009298
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences624113
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTATGG4850.0088708210.483731
CACATTT8000.00455013488.1336883
AAAGATG12305.432326E-47.0536054
AAATTTT16850.0029965055.5779994
Produced by FastQC (version 0.11.5)