FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009300

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009300
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences897990
Sequences flagged as poor quality0
Sequence length100-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GACAATT6300.00664352169.063841
CGAATTC9653.8657308E-48.0969055
GAATTCG9950.00464849277.1388886
CCCGGAT11100.00163454537.0734691
AGCAAAA12300.0050545356.352456
CCGAAAT12400.0052280176.33189541
CTTTTCT15850.00168805495.85432531
Produced by FastQC (version 0.11.5)