FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009319

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009319
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences451201
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACGT1556.809757E-527.1934837
TCTACCC1050.00898483326.761847
ACACGTC2001.3583005E-524.587448
CACTATT2300.002004153822.971207145
AGCACAC3153.9892257E-822.3015355
GAGCACA2859.293593E-619.7214374
CACGTCT2500.001718894116.859969
AGAGCAC2952.7023908E-416.6676043
GCACACG3750.001664832713.1133016
CTCAAGC3850.001977465812.8167361
GAAGAGC6306.5050373E-410.0702921
GATGGAG6350.0080652078.8503725
CTGACAC1900.00330091367.39504750-54
Produced by FastQC (version 0.11.5)