FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009324

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009324
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences730158
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCACAT4700.007577195810.709291
CTCACCG6901.0816132E-410.4210471
CCAAAAC6750.00102266189.5873641
CTCCAAT6450.00758325638.9184781
CAAGCAC6600.00915452658.7157861
CTTTGAT11400.0020030766.93822341
CTTCTGT12250.0042617466.4567961
TCGTAGG4000.0046507455.00351265-69
Produced by FastQC (version 0.11.5)