FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009334

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009334
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences655630
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTGGATC5650.002569970710.1681132
CCCCCCC1150.00300998549.97832230-34
TCAATTC6050.00457458349.4835293
CCCGCCG10256.980037E-69.131611
CTTTTAT12255.4389413E-47.0529861
ATCCTGC10550.00746452066.79802756
GAAAATC12700.00637272146.21189834
Produced by FastQC (version 0.11.5)