FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009336

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009336
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1872661
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTGGCT12054.6532112E-47.1516231
TCGCATT12557.85055E-46.83149052
GGGGGGG3108.887501E-56.8220253130-134
CCAACGA13000.008025996.07658771
TCAGATC15150.00649669635.65908962
CAAGCTT17650.0056248995.2894321
CCCAGAT18450.0094414375.06007961
CTTTGAT29851.1339034E-55.0522561
AGACTCG4200.004301415.0353045130-134
Produced by FastQC (version 0.11.5)