FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009342

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009342
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1678754
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTAAAT11050.00131338227.22195341
CCCGGAC12100.00341997676.5952551
CTGCCCT14250.00277173756.10928871
CACCGAA15500.00705943685.61660431
CTTTAAT20157.269358E-45.4005811
CTTAAAA19200.00231923355.2899441
CAAACCA18250.0073846165.1677891
CTCAAAA21400.00162208555.0851271
CAAAACA21500.00181351095.04247954
Produced by FastQC (version 0.11.5)