FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009348

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009348
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences585846
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCGGTT4050.003236489612.003051
TTCGATA4950.001157856211.1891052
GTCAATA5602.5922887E-411.1266662
TTCGGGT4500.00732549510.7575657
AAAAAGC18350.00238678565.27618933
Produced by FastQC (version 0.11.5)