FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009360

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009360
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1421596
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTCTAC11753.357792E-47.3575161
AACAACC10750.00108628357.35203272
CTCACGG11600.0023621676.83160161
CTTAAAA13802.8308376E-46.78659731
GTTCAAA14856.9066754E-46.30673741
CCAGCTT20952.2689752E-45.5020411
Produced by FastQC (version 0.11.5)