FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009366

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009366
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences440843
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCCCTAC1751.3749898E-424.5226279
TTCCCTA1801.6645453E-423.8414448
ACACTCT2751.3462549E-418.2579691
CACTCTT3559.587431E-414.1081912
ACTCTTT5601.9140188E-411.4949823
GTTCCGC5550.002235074810.3391321
GCAATTT6457.064929E-49.9801393
CTTTCCC5850.00354042449.7811056
ACAGAAT6550.0089727488.7357964
ACACACC2200.00925522956.6497498110-114
Produced by FastQC (version 0.11.5)