FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009372

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009372
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences478854
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCAATCC4650.0092970510.4167533
TGATACA5350.002221230710.3472164
CCAAAGA6000.00573291639.2262672
CTTTCAT7000.00194070468.935951
CTTCCAG10952.2438649E-47.61663961
Produced by FastQC (version 0.11.5)