FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009376

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009376
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1949707
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTTAAG10601.0845925E-48.1128721
CTCAAAT15852.3521196E-46.32991651
GTTTAAA14100.0028250036.09903861
GTTCAGG19056.2326544E-56.0189981
CTTAAAT14750.00466972785.83026741
TTTAAGA18450.00164661495.43608242
CAAGCAT19200.00270527165.2254781
Produced by FastQC (version 0.11.5)