FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009384

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009384
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3302742
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTCAAT27957.0330316E-75.5945571
CCCAAAT18750.00222957625.307031
CCCGCAT20600.00128540295.1754591
GTTTGAC23752.95242E-45.0875671
Produced by FastQC (version 0.11.5)