FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009395

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009395
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2940984
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAGTT12104.686913E-47.14748141
CTCAGGG10750.0085572186.7042261
TCTCGAC13150.0087680766.02511552
GTGCAAT26855.212739E-55.09995651
Produced by FastQC (version 0.11.5)