FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009405

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009405
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences405147
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATACGA3050.005423351714.1885917
GTTCAGT3350.00979548312.9756271
GCTTTTT10550.00705406356.83652545
CTATGAC2900.0032698326.019815120-124
Produced by FastQC (version 0.11.5)