FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009411

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009411
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1260079
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAAAG11402.862541E-47.4600511
CCCAGAT11600.00280616016.7204771
CACGAAA10550.008386516.71758131
CACCGTT13950.0028364866.0963861
TTCCGGG17651.9355952E-45.9548738
GGGATTT14400.00453406535.84534653
AGATTTA14600.0052844055.7652734
CTTCCAT21607.405425E-55.57776981
AATTTCC18200.00183158185.3899245
Produced by FastQC (version 0.11.5)