FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009424

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009424
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1702888
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AATTCCC14555.227E-46.45366535
CCCGCAC14600.00361780335.96537881
TCAGGGC15250.0061904135.6837838
CTTCAGA17050.00330260885.53386551
GCATTCA17700.00542614055.30559874
CACAGAT19300.00246221945.26478151
TGAATCC18000.0066076935.2171723
Produced by FastQC (version 0.11.5)