FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009444

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009444
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences446503
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACACGTC1204.581549E-429.5845478
CACGTCT1255.817997E-428.4011639
CACACGT1450.001383817324.4837637
AGAGCAC1650.002935077321.5136243
AGCACAC2650.00236270916.076135
CCTCAAC3000.00531848614.2308641
GAAGAGC4252.5468768E-413.3937541
CTCCGAA3200.0081542213.3414351
CAAAAGA9750.00374175547.2978791
Produced by FastQC (version 0.11.5)