FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009445

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009445
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1117192
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCACGAG4400.004640545711.4394891
GTGCAAT10050.00455115557.15476231
CAAATAT21106.3644475E-66.1341071
CTTCCAC16350.0022408545.7172461
ATTTCAG17800.00633544575.23553286
Produced by FastQC (version 0.11.5)