FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009455

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009455
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences624748
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAAAT5008.4796175E-411.6134121
TCAAATC6700.0098518468.6375552
CTTTTAC8850.0011898118.2015631
CTTGAAA10951.3595892E-47.95439241
CTTTTTT23351.6638072E-45.28447531
Produced by FastQC (version 0.11.5)