FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009475

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009475
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences718009
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AATAGCC4600.0062429410.992077
CTCAAGA4850.00842563810.557131
GGTAATC6300.0054304539.2883591
CTTGTTT7700.00290190548.5495131
GATCAGC10500.00667274656.8774752
CGATCAG11000.0092390216.6496211
GTCCTGG3651.9723964E-45.947617115-119
Produced by FastQC (version 0.11.5)