FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009481

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009481
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1482945
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCAATT5800.00316492179.9173681
CTAAAAC11200.00166543917.0616971
CCAATTC10500.00713981876.8306063
CGAAAAT14800.00467174875.8298041
CCCTGCT15150.00605391665.6951221
TTTAAGT15650.0089838445.49495177
ACATTTA20309.407259E-45.29746344
CTTTAAT25401.2326316E-45.09534031
CTTCAAG21450.00188304515.0280361
Produced by FastQC (version 0.11.5)