FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009489

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009489
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences659143
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTTGTT6253.234626E-511.7330691
TTCGATT6300.00621678269.1367292
ATCAAAC8400.0073637657.70911462
CAAAAGA13351.5115182E-47.1409131
CATCAAA13952.593369E-46.8337771
AGAAATA14850.0048010095.81428244
CAAAGAA17800.00484444535.35568481
Produced by FastQC (version 0.11.5)