FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009494

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009494
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences775111
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTACGT1900.006043432318.992351
CAACCAC4650.006810073710.8644411
ATCTTGG6104.029018E-410.6097016
AATCGAT4800.00861984810.5249271
AACAAGC9602.7212445E-710.4882572
CTCTTGA6901.0421506E-410.4595561
CAATCGT5550.002126655510.4030171
CTTTAAG6658.6246047E-49.7674941
CTCAAAT6300.00606524859.1645621
CTTTAAA12601.1266566E-68.5917771
CATTCAT8950.00140762478.0637911
CAAAAGA16105.78304E-77.62053251
CTTTTAT16751.0833901E-67.3248111
CTTTAAT10050.0043870827.1811871
ATACAAT10800.0088121766.68249371
TTTGCGG12200.00408414666.48328837
GAAGATT12350.00463061736.40578372
TTCTGCA16955.3294207E-45.93910269
CTTTATT15000.00519259275.77367451
CGAAAAA16500.00238781055.68619441
Produced by FastQC (version 0.11.5)