FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009495

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009495
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1309472
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATTCGAT8800.0012350588.1721791
CAAAACT10951.5176153E-47.88111541
CCCAGCT14205.3431235E-57.09022861
CAAAGAT18400.0015145795.47180651
CCCGGCT17700.00571557275.28190571
Produced by FastQC (version 0.11.5)