FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009499

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009499
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences765706
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCGACA5700.002368510.268971
CCCACCA6200.00474938249.4408271
CCCATAT6550.00746024968.9363561
CTTTCAT13450.00131207846.52785871
CTTTCAA12800.0056201916.28773831
CAAAGAT13000.00660265336.19100431
GATATTC15400.00110251936.06581935
CTCTTTT15550.00664695545.64628271
Produced by FastQC (version 0.11.5)