FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009508

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009508
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1063703
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGATT5700.00258591610.1616031
CTTAGAA6900.00117509219.4436641
CTCAAAT10004.619267E-47.9641561
CTCGAAA8200.0056163987.94649651
GTTTCAT16052.4191401E-46.31538871
CTGAAAT17000.00327983065.5365791
CGAAAAG15900.0095473575.4642581
CTTCAAG18850.00188546015.37729361
Produced by FastQC (version 0.11.5)