FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009517

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009517
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences593293
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTGCTAG650.00932560548.73415145
TTCTAGA1300.003481904532.489433145
CCCGCAT4504.165547E-412.6375041
TTATCTC6300.0071967068.9750542
TTCAAAC7900.0049821478.0519872
GTTTCTT12500.00592297646.2555641
CAAAGAA16450.00275380055.6177351
Produced by FastQC (version 0.11.5)