FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009518

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009518
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences581750
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAACTAG553.2951363E-452.474499
CTTCAAT9652.96677E-69.7661821
CCTTCAC6100.00447875779.5075571
CTTCTAT7700.00314447668.4734551
CTTTTAA9904.0809985E-48.0550141
TTTTATT25709.85674E-86.185512
AGAATAT15500.00739777135.5912813
Produced by FastQC (version 0.11.5)