FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009524

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009524
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1003305
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGAGTAA2800.003315775715.2820765
GCAGTGT5550.00234896610.2798358
CTCTTGT6450.0078229038.8852911
GTCGGGA6600.0094431548.6833531
TAAATAG7750.0038709148.2818993
GTTTTGT12306.044988E-46.9890411
CTTCAAT15903.3749842E-56.758271
TTCAAGC11650.00271585146.7411242
CTTCAAG14250.0031884876.0326451
CTTTTCT21350.00185578645.0330911
Produced by FastQC (version 0.11.5)