FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009532

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009532
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences496538
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCCTCC2050.00941812917.5844421
CTTCAAT8004.6575806E-49.0120271
GGACGTC1300.0082574238.82780680-84
GATGGAC3850.00275869785.217482635-39
Produced by FastQC (version 0.11.5)