FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009538

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009538
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1118875
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CATCGAT7302.2293911E-49.7015721
TCGAACT6350.00772410968.8992462
AATAGTA9750.00405869547.2393958
CCGTAAT10200.00609095256.9432821
ACATTTA10450.0079292786.7565734
TCAAGAT11800.00347434366.58487653
CCGCCAT17650.00661415145.21631241
Produced by FastQC (version 0.11.5)