FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009547

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009547
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences900148
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTACGAT5551.3024672E-512.8224261
CCCAAAA8106.01504E-48.7857361
CCCCGGA9500.00290574237.49099641
CTTTAAT9650.00338680167.37455651
AATCTGA10700.00122102087.27086355
TATAAAG10650.0093472186.64201452
TTTTACA14757.943908E-46.23344857
Produced by FastQC (version 0.11.5)