FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009551

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009551
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences550523
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAACTCT2400.006530049718.737108145
GCAGTCA3903.4485286E-416.142738145
GTTCAAT4550.006180253311.0062411
CGCAAAT4700.00786448110.6549781
GTTTTGC7450.00271511058.6118686
CTTCCAG9500.00275544647.5305861
Produced by FastQC (version 0.11.5)