FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009566

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009566
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences493961
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTATGC2850.004069300414.8167211
CTCAAAT3900.002205651712.6322051
TTTGAGC4200.00399468911.669356
CTTTAAA6050.0053396359.306371
CAAAAAA12700.00773958546.09585571
Produced by FastQC (version 0.11.5)