FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009574

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009574
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences459299
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACACACG1750.004182262320.2386196
CATGTAT3250.00906159613.1301541
ATGTATA4150.00333408411.9546082
TTGAATT4500.00610068111.0248052
CCCGCCT4650.007584705510.7064871
Produced by FastQC (version 0.11.5)