FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009575

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009575
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1270209
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTAAAC3002.5017146E-416.8409581
CTTTAAT11853.6226783E-47.30891471
ATATGAC10000.0043179977.19368846
GGTGAAT11150.00152519047.1204561
GTTTGAA14951.00102276E-46.75891351
CATCAAT18254.180596E-66.7232011
CTTTCAC14300.00305164656.05668831
CTTCAAG15750.00137145425.95734551
CCAGAAT16550.00247736465.6693771
CTTATTT17950.00105739135.62928961
Produced by FastQC (version 0.11.5)