FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009582

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009582
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences751468
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACGT1650.00270535921.820267
AGCACAC4600.00639112210.9575645
CACTGAT4750.00781558810.6647581
CTTCAAT11201.9714389E-79.69214251
CAAGAAT9100.00161428187.95252661
CTTCAAA12457.5164586E-57.55649761
CAAAAAT19900.0037333325.0912161
Produced by FastQC (version 0.11.5)