FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009585

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009585
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1162938
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTCTAT8600.0094794497.49521061
CAACGAA9950.0042917237.198081
ATTTAAT15251.891035E-57.04467871
ATTTGCC15000.00589031455.70897636
CTTCAAA18200.0083031215.11577841
ACATATT18250.0089152035.0846474
Produced by FastQC (version 0.11.5)