FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009586

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009586
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3004253
Sequences flagged as poor quality0
Sequence length100-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAGAT13750.00187465946.3262641
CTCCGAA28952.478555E-86.00940471
CCCACAT19356.6282824E-55.99387651
CTCTTAT19655.248472E-45.5334691
CTCCGCT24958.2050065E-55.22962671
CTTTGAT40607.759809E-95.1777461
Produced by FastQC (version 0.11.5)