FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009588

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009588
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences535748
Sequences flagged as poor quality0
Sequence length100-151
%GC37

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCAATA2950.00433602314.6761771
CTCATAT7451.9302945E-510.6541821
GTTGGAT4750.00798094710.6337911
AACGTAT5400.00181176710.6042313
CTTAAAT8700.0098142977.4646071
TTCGATC3300.0026254346.50592666
CAGAAAT12250.00410337566.4794821
Produced by FastQC (version 0.11.5)