FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009594

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009594
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences928791
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTACAT6550.0085830428.7851641
CCCGGAT10257.010772E-58.42091
TAAATCC9150.00184510377.8458053
CCCGGCT10206.1252055E-47.7569981
GTTTTGA10609.236348E-47.46428161
CGATATT12000.00342577376.59344861
GCTTCTG13950.00244902736.17640645
Produced by FastQC (version 0.11.5)