FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009596

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009596
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences835883
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCACAT4750.007353277410.7529291
GTTAAAG6355.102334E-410.3416811
ATTCAGT6400.0063094779.1207881
TCACATT7550.00276854948.5944172
CCCGCAT7850.00353383278.3655631
CCAGAAT10456.806352E-47.68066361
CTTTCCT12757.3807174E-46.86741731
CTTCACC11800.0024697776.8019441
CTTTCAA16050.0015068025.91004371
GTTTCTT15150.0051359135.7795091
CAAAAAG17550.00435431355.40491151
Produced by FastQC (version 0.11.5)